Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CUEDC1Q9NWM3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 AC100850.1-201ENST00000506768 649 ntBASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 AC244452.3-201ENST00000636814 210 ntBASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CUEDC1Q9NWM3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms