Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 MIR1908-201ENST00000410394 80 ntBASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 TUBB8P8-201ENST00000458717 1058 ntBASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 AL008721.1-201ENST00000609964 604 ntBASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BLOC1S4Q9NUP1 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 AC004899.1-201ENST00000424687 1714 ntBASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 POM121L10P-201ENST00000436994 1285 ntBASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 AC124068.2-201ENST00000569473 1109 ntBASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 AC104982.3-201ENST00000581995 514 ntBASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 AP000346.4-201ENST00000614827 381 ntBASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 AC133540.1-201ENST00000620845 1019 ntBASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.17■□□□□ 0.18
BLOC1S4Q9NUP1 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms