Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 LINC02486-201ENST00000604157 3000 ntBASIC16.38■□□□□ 0.21
CBX8Q9HC52 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 SNHG9-202ENST00000564014 471 ntBASIC16.38■□□□□ 0.21
CBX8Q9HC52 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 AL590440.2-201ENST00000641973 1595 ntBASIC16.38■□□□□ 0.21
CBX8Q9HC52 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CBX8Q9HC52 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX8Q9HC52 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CBX8Q9HC52 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CBX8Q9HC52 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.37■□□□□ 0.21
CBX8Q9HC52 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CBX8Q9HC52 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.37■□□□□ 0.21
CBX8Q9HC52 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
CBX8Q9HC52 AC015911.4-201ENST00000588022 1070 ntBASIC16.37■□□□□ 0.21
CBX8Q9HC52 AL390955.2-201ENST00000603032 514 ntBASIC16.37■□□□□ 0.21
CBX8Q9HC52 AC079781.4-201ENST00000641908 219 ntBASIC16.37■□□□□ 0.21
CBX8Q9HC52 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX8Q9HC52 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX8Q9HC52 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CBX8Q9HC52 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX8Q9HC52 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX8Q9HC52 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX8Q9HC52 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX8Q9HC52 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC16.36■□□□□ 0.21
CBX8Q9HC52 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.36■□□□□ 0.21
CBX8Q9HC52 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX8Q9HC52 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX8Q9HC52 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CBX8Q9HC52 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.36■□□□□ 0.21
CBX8Q9HC52 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CBX8Q9HC52 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX8Q9HC52 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX8Q9HC52 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC16.36■□□□□ 0.21
CBX8Q9HC52 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX8Q9HC52 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CBX8Q9HC52 LRRC59-203ENST00000576448 1531 ntBASIC16.36■□□□□ 0.21
CBX8Q9HC52 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC16.36■□□□□ 0.21
CBX8Q9HC52 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX8Q9HC52 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.36■□□□□ 0.21
CBX8Q9HC52 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX8Q9HC52 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX8Q9HC52 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CBX8Q9HC52 AC020910.5-201ENST00000623668 1865 ntBASIC16.36■□□□□ 0.21
CBX8Q9HC52 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX8Q9HC52 AL928654.5-201ENST00000624831 2501 ntBASIC16.36■□□□□ 0.21
CBX8Q9HC52 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX8Q9HC52 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CBX8Q9HC52 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX8Q9HC52 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CBX8Q9HC52 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms