Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NKX6-2Q9C056 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 AC073335.2-201ENST00000610177 3441 ntBASIC11.9□□□□□ -0.5
NKX6-2Q9C056 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 FAM220BP-201ENST00000377689 816 ntBASIC11.9□□□□□ -0.5
NKX6-2Q9C056 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 AC003958.1-201ENST00000435883 421 ntBASIC11.9□□□□□ -0.5
NKX6-2Q9C056 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 RNA5SP410-201ENST00000516285 106 ntBASIC11.9□□□□□ -0.5
NKX6-2Q9C056 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 UNC93B6-202ENST00000528242 690 ntBASIC11.9□□□□□ -0.5
NKX6-2Q9C056 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 AC124319.4-201ENST00000622931 2161 ntBASIC11.9□□□□□ -0.5
NKX6-2Q9C056 AL358472.4-201ENST00000633140 710 ntBASIC11.9□□□□□ -0.5
NKX6-2Q9C056 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NKX6-2Q9C056 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
NKX6-2Q9C056 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
NKX6-2Q9C056 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
NKX6-2Q9C056 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
NKX6-2Q9C056 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 AGGF1P10-201ENST00000635005 2191 ntBASIC11.89□□□□□ -0.51
NKX6-2Q9C056 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 AC126564.1-201ENST00000623628 2013 ntBASIC11.89□□□□□ -0.51
NKX6-2Q9C056 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 AC010970.1-201ENST00000445125 1848 ntBASIC11.89□□□□□ -0.51
NKX6-2Q9C056 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 AKR1C7P-201ENST00000305623 895 ntBASIC11.89□□□□□ -0.51
NKX6-2Q9C056 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms