Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDH11YQ9BZA8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 ODCP-201ENST00000459650 1639 ntBASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 KRT8P18-201ENST00000413425 1445 ntBASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 LINC00115-201ENST00000473798 1317 ntBASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 AL118516.1-201ENST00000564152 670 ntBASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 MIR6746-201ENST00000620971 63 ntBASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11YQ9BZA8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 COX20P1-201ENST00000366529 357 ntBASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 FAM86B3P-203ENST00000523992 854 ntBASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 CMC2-204ENST00000562713 573 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 CMC2-209ENST00000565108 399 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 AP005264.6-204ENST00000588436 719 ntBASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 AL359091.4-201ENST00000610052 409 ntBASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 MIR6074-201ENST00000612054 107 ntBASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PCDH11YQ9BZA8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 MSANTD2P1-201ENST00000445341 1368 ntBASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 AC006529.1-201ENST00000459978 637 ntBASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 TRMT112P3-201ENST00000580149 358 ntBASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 AC006483.2-201ENST00000609813 515 ntBASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms