Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 AJ011931.1-201ENST00000618749 2492 ntBASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 ODCP-201ENST00000459650 1639 ntBASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 KRT8P18-201ENST00000413425 1445 ntBASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 LINC00115-201ENST00000473798 1317 ntBASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 AL118516.1-201ENST00000564152 670 ntBASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 MIR6746-201ENST00000620971 63 ntBASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH11XQ9BZA7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 COX20P1-201ENST00000366529 357 ntBASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 FAM86B3P-203ENST00000523992 854 ntBASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 AP005264.6-204ENST00000588436 719 ntBASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 AL359091.4-201ENST00000610052 409 ntBASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 MIR6074-201ENST00000612054 107 ntBASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PCDH11XQ9BZA7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 MSANTD2P1-201ENST00000445341 1368 ntBASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 AC006529.1-201ENST00000459978 637 ntBASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH11XQ9BZA7 TRMT112P3-201ENST00000580149 358 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms