Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 AL603764.1-201ENST00000636452 321 ntBASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.4□□□□□ -0.42
PCGF1Q9BSM1 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.43
PCGF1Q9BSM1 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
PCGF1Q9BSM1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 AC138969.2-201ENST00000532739 9932 ntBASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 ACTBP11-201ENST00000436287 1126 ntBASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 HOMER2P2-201ENST00000451621 847 ntBASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 PFN1P12-201ENST00000455938 534 ntBASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 AP006547.1-201ENST00000563435 692 ntBASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 DUX4L45-201ENST00000566406 1057 ntBASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 MIR4538-201ENST00000581377 78 ntBASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 OR10B1P-201ENST00000601666 907 ntBASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 AC091271.1-201ENST00000611877 1162 ntBASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 AC140479.7-201ENST00000636301 2332 ntBASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms