Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 AC016397.2-201ENST00000624848 1985 ntBASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 INE2-201ENST00000630399 1874 ntBASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 AC241585.1-201ENST00000433527 519 ntBASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 SRD5A3P1-201ENST00000603021 949 ntBASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 AC093813.1-201ENST00000605066 256 ntBASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 BX539320.1-201ENST00000623759 877 ntBASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 AC015909.5-201ENST00000624336 2266 ntBASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CMSS1Q9BQ75 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 STRCP1-201ENST00000509801 5328 ntBASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 AC004899.2-201ENST00000622993 3860 ntBASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 AC090505.1-201ENST00000430515 1834 ntBASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 AL589987.1-201ENST00000453380 819 ntBASIC12.61□□□□□ -0.39
CMSS1Q9BQ75 VDAC1P7-201ENST00000462417 847 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms