Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 KRT8P35-201ENST00000483942 1338 ntBASIC13.71□□□□□ -0.21
TM9SF2Q99805 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TM9SF2Q99805 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.71□□□□□ -0.21
TM9SF2Q99805 MSTO2P-201ENST00000314835 1709 ntBASIC13.71□□□□□ -0.21
TM9SF2Q99805 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
TM9SF2Q99805 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.71□□□□□ -0.21
TM9SF2Q99805 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.71□□□□□ -0.21
TM9SF2Q99805 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.71□□□□□ -0.21
TM9SF2Q99805 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.71□□□□□ -0.21
TM9SF2Q99805 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TM9SF2Q99805 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.71□□□□□ -0.21
TM9SF2Q99805 RHOXF1P1-202ENST00000635473 501 ntBASIC13.71□□□□□ -0.21
TM9SF2Q99805 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.71□□□□□ -0.21
TM9SF2Q99805 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF2Q99805 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.71□□□□□ -0.22
TM9SF2Q99805 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TM9SF2Q99805 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TM9SF2Q99805 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TM9SF2Q99805 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TM9SF2Q99805 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TM9SF2Q99805 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
TM9SF2Q99805 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TM9SF2Q99805 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TM9SF2Q99805 Z82170.1-201ENST00000625081 3192 ntBASIC13.71□□□□□ -0.22
TM9SF2Q99805 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.71□□□□□ -0.22
TM9SF2Q99805 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TM9SF2Q99805 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TM9SF2Q99805 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 GHSR-202ENST00000427970 912 ntBASIC13.7□□□□□ -0.22
TM9SF2Q99805 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 AC132938.4-201ENST00000623835 848 ntBASIC13.7□□□□□ -0.22
TM9SF2Q99805 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.7□□□□□ -0.22
TM9SF2Q99805 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TM9SF2Q99805 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms