Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM11Q96F44 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM11Q96F44 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM11Q96F44 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM11Q96F44 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM11Q96F44 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
TRIM11Q96F44 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM11Q96F44 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRIM11Q96F44 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM11Q96F44 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 CU639417.3-201ENST00000624240 1404 ntBASIC15.51■□□□□ 0.07
TRIM11Q96F44 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 TUBB8P4-201ENST00000511806 1324 ntBASIC15.51■□□□□ 0.07
TRIM11Q96F44 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 CNN2P8-201ENST00000421872 913 ntBASIC15.51■□□□□ 0.07
TRIM11Q96F44 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 KRT43P-201ENST00000434019 910 ntBASIC15.51■□□□□ 0.07
TRIM11Q96F44 COX5BP1-201ENST00000507622 393 ntBASIC15.51■□□□□ 0.07
TRIM11Q96F44 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 AP003171.2-201ENST00000528208 925 ntBASIC15.51■□□□□ 0.07
TRIM11Q96F44 KRT90P-201ENST00000549264 1064 ntBASIC15.51■□□□□ 0.07
TRIM11Q96F44 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ZACNP1-201ENST00000612259 710 ntBASIC15.51■□□□□ 0.07
TRIM11Q96F44 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 AC126335.2-201ENST00000623362 4637 ntBASIC15.51■□□□□ 0.07
TRIM11Q96F44 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM11Q96F44 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM11Q96F44 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 AC027601.3-201ENST00000622907 509 ntBASIC15.5■□□□□ 0.07
TRIM11Q96F44 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM11Q96F44 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM11Q96F44 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms