Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 BAP1-211ENST00000615113 489 ntBASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 AC004840.1-201ENST00000636359 365 ntBASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 AL138799.1-201ENST00000448213 1675 ntBASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM4Q8WVI0 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 NUS1P3-201ENST00000423502 862 ntBASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 AC005237.2-201ENST00000434368 219 ntBASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 AL591424.1-201ENST00000442569 1213 ntBASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 AC103988.2-201ENST00000561804 725 ntBASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 AC010970.1-201ENST00000445125 1848 ntBASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 AC139712.1-201ENST00000378256 1875 ntBASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM4Q8WVI0 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM4Q8WVI0 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.4
SMIM4Q8WVI0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM4Q8WVI0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM4Q8WVI0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM4Q8WVI0 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM4Q8WVI0 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
SMIM4Q8WVI0 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM4Q8WVI0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
SMIM4Q8WVI0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.52□□□□□ -0.4
SMIM4Q8WVI0 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SMIM4Q8WVI0 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM4Q8WVI0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms