Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3IL1Q8TBN0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3IL1Q8TBN0 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3IL1Q8TBN0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RAB3IL1Q8TBN0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.7□□□□□ -0.06
RAB3IL1Q8TBN0 PCDHA5-203ENST00000614258 4248 ntBASIC14.7□□□□□ -0.06
RAB3IL1Q8TBN0 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
RAB3IL1Q8TBN0 DGCR9-201ENST00000609630 2415 ntBASIC14.7□□□□□ -0.06
RAB3IL1Q8TBN0 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB3IL1Q8TBN0 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 AC027612.1-201ENST00000445234 2395 ntBASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 AC026410.3-201ENST00000514280 936 ntBASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB3IL1Q8TBN0 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 AL391069.4-201ENST00000609583 481 ntBASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 SPDYE12P-201ENST00000618416 771 ntBASIC14.68□□□□□ -0.06
RAB3IL1Q8TBN0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms