Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNRC6AQ8NDV7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNRC6AQ8NDV7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 FO393412.1-201ENST00000619841 382 ntBASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNRC6AQ8NDV7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
TNRC6AQ8NDV7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 KLF17P1-201ENST00000547105 1126 ntBASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 AC068867.1-201ENST00000559855 150 ntBASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 RPS5-204ENST00000598098 536 ntTSL 2 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 AL118522.1-201ENST00000611368 560 ntBASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 HMGB1P24-201ENST00000611897 328 ntBASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 GUSBP10-201ENST00000417412 665 ntBASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 AL118516.1-201ENST00000564152 670 ntBASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 THY1-209ENST00000580275 578 ntTSL 3 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNRC6AQ8NDV7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TNRC6AQ8NDV7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TNRC6AQ8NDV7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.13□□□□□ -0.31
TNRC6AQ8NDV7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TNRC6AQ8NDV7 AL390755.1-201ENST00000623716 2027 ntBASIC13.13□□□□□ -0.31
TNRC6AQ8NDV7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms