Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 AC090386.2-201ENST00000623010 1039 ntBASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ARHGEF39Q8N4T4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 MEG3_2.1-201ENST00000611456 105 ntBASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 KRT8P21-201ENST00000430398 1491 ntBASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ARHGEF39Q8N4T4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 AL157791.1-201ENST00000553667 1699 ntBASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 AC008132.1-202ENST00000342005 1389 ntBASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 LINC01165-201ENST00000445190 1623 ntBASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 AC007191.1-201ENST00000623179 2995 ntBASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 AP002353.1-201ENST00000528257 1599 ntBASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 ISCA2P1-201ENST00000425548 448 ntBASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 AC024681.1-201ENST00000521917 487 ntBASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms