Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP31Q70CQ4 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP31Q70CQ4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP31Q70CQ4 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP31Q70CQ4 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP31Q70CQ4 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP31Q70CQ4 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 RPS23-207ENST00000511844 530 ntTSL 2 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 AC013553.1-201ENST00000560906 267 ntBASIC19.11■□□□□ 0.65
USP31Q70CQ4 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP31Q70CQ4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP31Q70CQ4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP31Q70CQ4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP31Q70CQ4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
USP31Q70CQ4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP31Q70CQ4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP31Q70CQ4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP31Q70CQ4 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 STK24P1-201ENST00000455035 1291 ntBASIC19.1■□□□□ 0.65
USP31Q70CQ4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 AC011247.3-201ENST00000603297 438 ntBASIC19.1■□□□□ 0.65
USP31Q70CQ4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 AC138761.6-201ENST00000583997 1423 ntBASIC19.1■□□□□ 0.65
USP31Q70CQ4 AC117503.4-201ENST00000623229 1418 ntBASIC19.1■□□□□ 0.65
USP31Q70CQ4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP31Q70CQ4 TBC1D27-202ENST00000424239 1573 ntBASIC19.1■□□□□ 0.65
USP31Q70CQ4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
USP31Q70CQ4 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 PFN2-212ENST00000490975 858 ntTSL 4 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 NSD1-211ENST00000511258 809 ntTSL 3 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 CICP24-201ENST00000605464 2705 ntBASIC19.09■□□□□ 0.65
USP31Q70CQ4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP31Q70CQ4 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC19.09■□□□□ 0.65
USP31Q70CQ4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms