Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 VENTXP1-201ENST00000569334 2716 ntBASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 AC098831.1-202ENST00000438821 336 ntBASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 EEF1DP4-201ENST00000446006 880 ntBASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 AC079776.4-201ENST00000511039 504 ntBASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 UNC93B6-202ENST00000528242 690 ntBASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 AL022323.5-201ENST00000624101 2059 ntBASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 RN7SL832P-201ENST00000607781 1756 ntBASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 AC023141.13-201ENST00000604991 943 ntBASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 CICP1-201ENST00000416803 2410 ntBASIC11.41□□□□□ -0.58
KCNIP4Q6PIL6 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms