Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 AC190387.1-201ENST00000551683 408 ntBASIC14.12□□□□□ -0.15
RFTN2Q52LD8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.12□□□□□ -0.15
RFTN2Q52LD8 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 ALG3P1-201ENST00000508806 1114 ntBASIC14.11□□□□□ -0.15
RFTN2Q52LD8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 TP53TG3HP-202ENST00000569755 579 ntBASIC14.11□□□□□ -0.15
RFTN2Q52LD8 RN7SL48P-201ENST00000579283 293 ntBASIC14.11□□□□□ -0.15
RFTN2Q52LD8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFTN2Q52LD8 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFTN2Q52LD8 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms