Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LIMK2P53671 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LIMK2P53671 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 SBF1P1-201ENST00000444527 5631 ntBASIC14.81□□□□□ -0.04
LIMK2P53671 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LIMK2P53671 AC015688.4-201ENST00000580780 1647 ntBASIC14.81□□□□□ -0.04
LIMK2P53671 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.8□□□□□ -0.04
LIMK2P53671 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LIMK2P53671 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.8□□□□□ -0.04
LIMK2P53671 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
LIMK2P53671 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.8□□□□□ -0.04
LIMK2P53671 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.8□□□□□ -0.04
LIMK2P53671 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.8□□□□□ -0.04
LIMK2P53671 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.8□□□□□ -0.04
LIMK2P53671 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 AC078819.1-201ENST00000547454 765 ntBASIC14.8□□□□□ -0.04
LIMK2P53671 AC012085.1-201ENST00000548270 765 ntBASIC14.8□□□□□ -0.04
LIMK2P53671 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.8□□□□□ -0.04
LIMK2P53671 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.8□□□□□ -0.04
LIMK2P53671 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.8□□□□□ -0.04
LIMK2P53671 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.8□□□□□ -0.04
LIMK2P53671 GPR182-203ENST00000622922 591 ntBASIC14.8□□□□□ -0.04
LIMK2P53671 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.8□□□□□ -0.04
LIMK2P53671 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.8□□□□□ -0.04
LIMK2P53671 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 AC020907.1-201ENST00000616460 1350 ntBASIC14.8□□□□□ -0.04
LIMK2P53671 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.8□□□□□ -0.04
LIMK2P53671 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.8□□□□□ -0.04
LIMK2P53671 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.8□□□□□ -0.04
LIMK2P53671 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LIMK2P53671 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LIMK2P53671 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LIMK2P53671 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK2P53671 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.79□□□□□ -0.04
LIMK2P53671 CICP16-201ENST00000502609 2813 ntBASIC14.79□□□□□ -0.04
LIMK2P53671 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.79□□□□□ -0.04
LIMK2P53671 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LIMK2P53671 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LIMK2P53671 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LIMK2P53671 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.79□□□□□ -0.04
LIMK2P53671 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LIMK2P53671 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.79□□□□□ -0.04
LIMK2P53671 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
LIMK2P53671 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LIMK2P53671 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.79□□□□□ -0.04
LIMK2P53671 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.79□□□□□ -0.04
LIMK2P53671 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.79□□□□□ -0.04
LIMK2P53671 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.79□□□□□ -0.04
LIMK2P53671 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LIMK2P53671 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LIMK2P53671 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.79□□□□□ -0.04
LIMK2P53671 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.79□□□□□ -0.04
LIMK2P53671 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.79□□□□□ -0.04
LIMK2P53671 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms