Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC007967.4-201ENST00000614700 386 ntBASIC11.66□□□□□ -0.54
CDC34P49427 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.66□□□□□ -0.54
CDC34P49427 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.66□□□□□ -0.54
CDC34P49427 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.66□□□□□ -0.54
CDC34P49427 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC34P49427 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CDC34P49427 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC34P49427 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.66□□□□□ -0.54
CDC34P49427 KRT8P14-201ENST00000414254 1442 ntBASIC11.66□□□□□ -0.54
CDC34P49427 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.66□□□□□ -0.54
CDC34P49427 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC34P49427 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
CDC34P49427 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CDC34P49427 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 AL805961.2-201ENST00000642139 4817 ntBASIC11.66□□□□□ -0.54
CDC34P49427 AC072061.1-201ENST00000569710 2234 ntBASIC11.66□□□□□ -0.54
CDC34P49427 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC34P49427 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.65□□□□□ -0.54
CDC34P49427 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.65□□□□□ -0.54
CDC34P49427 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
CDC34P49427 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.65□□□□□ -0.54
CDC34P49427 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.65□□□□□ -0.54
CDC34P49427 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 IPPK-202ENST00000375522 882 ntTSL 3 BASIC11.65□□□□□ -0.54
CDC34P49427 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.65□□□□□ -0.54
CDC34P49427 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.65□□□□□ -0.54
CDC34P49427 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.65□□□□□ -0.54
CDC34P49427 AL662844.1-201ENST00000546340 181 ntBASIC11.65□□□□□ -0.54
CDC34P49427 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC11.65□□□□□ -0.54
CDC34P49427 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.65□□□□□ -0.54
CDC34P49427 AC000095.1-201ENST00000603208 874 ntBASIC11.65□□□□□ -0.54
CDC34P49427 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.65□□□□□ -0.54
CDC34P49427 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.65□□□□□ -0.54
CDC34P49427 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 AC011498.7-201ENST00000624986 2027 ntBASIC11.65□□□□□ -0.54
CDC34P49427 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC34P49427 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC34P49427 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CDC34P49427 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.65□□□□□ -0.55
CDC34P49427 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
CDC34P49427 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
CDC34P49427 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CDC34P49427 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.65□□□□□ -0.55
CDC34P49427 AGAP10P-201ENST00000454844 2418 ntBASIC11.65□□□□□ -0.55
CDC34P49427 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CDC34P49427 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.65□□□□□ -0.55
CDC34P49427 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC34P49427 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC34P49427 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC34P49427 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC34P49427 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms