Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AC025280.2-201ENST00000625056 2547 ntBASIC9.52□□□□□ -0.89
PCP4P48539 AC090987.1-201ENST00000523502 2072 ntTSL 2 BASIC9.52□□□□□ -0.89
PCP4P48539 CAMK2G-206ENST00000394762 3767 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PCP4P48539 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC9.52□□□□□ -0.89
PCP4P48539 KBTBD6-201ENST00000379485 5178 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
PCP4P48539 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
PCP4P48539 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PCP4P48539 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PCP4P48539 TBC1D8B-201ENST00000276175 3538 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
PCP4P48539 ARHGEF26-201ENST00000356448 5254 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
PCP4P48539 ZNF720-201ENST00000316491 2769 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PCP4P48539 LILRB1-201ENST00000324602 2774 ntAPPRIS P4 TSL 5 BASIC9.52□□□□□ -0.89
PCP4P48539 ATP8B3-203ENST00000526092 2759 ntTSL 2 BASIC9.52□□□□□ -0.89
PCP4P48539 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC9.51□□□□□ -0.89
PCP4P48539 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC9.51□□□□□ -0.89
PCP4P48539 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
PCP4P48539 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
PCP4P48539 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 ACTR1A-201ENST00000369905 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 RCC1-203ENST00000373833 2844 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 CCDC36-203ENST00000438782 2843 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
PCP4P48539 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
PCP4P48539 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 GBA-201ENST00000327247 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC9.51□□□□□ -0.89
PCP4P48539 LINC00606-201ENST00000412578 2869 ntTSL 2 BASIC9.51□□□□□ -0.89
PCP4P48539 AL080251.1-201ENST00000494072 4369 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
PCP4P48539 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 TMEM108-AS1-202ENST00000505721 2427 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
PCP4P48539 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
PCP4P48539 CNGA3-201ENST00000272602 3470 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 FCHSD1-201ENST00000435817 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 AC241952.1-201ENST00000612480 6897 ntBASIC9.51□□□□□ -0.89
PCP4P48539 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC9.51□□□□□ -0.89
PCP4P48539 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC9.51□□□□□ -0.89
PCP4P48539 TNFAIP3-208ENST00000615468 3818 ntTSL 5 BASIC9.51□□□□□ -0.89
PCP4P48539 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 MPP4-205ENST00000409474 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 AC005549.1-201ENST00000579438 1629 ntBASIC9.51□□□□□ -0.89
PCP4P48539 AP002991.2-201ENST00000623807 2801 ntBASIC9.51□□□□□ -0.89
PCP4P48539 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 ZNRD1ASP-215ENST00000425604 1986 ntTSL 3 BASIC9.51□□□□□ -0.89
PCP4P48539 FAM90A17P-201ENST00000533716 1957 ntBASIC9.51□□□□□ -0.89
PCP4P48539 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC9.51□□□□□ -0.89
PCP4P48539 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 CUL7-201ENST00000265348 5254 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC9.51□□□□□ -0.89
PCP4P48539 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
PCP4P48539 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 SLC18A1-202ENST00000276373 2753 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 RGS3-203ENST00000343817 3689 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC9.51□□□□□ -0.89
PCP4P48539 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC9.51□□□□□ -0.89
PCP4P48539 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PCP4P48539 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
PCP4P48539 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
PCP4P48539 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
PCP4P48539 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
PCP4P48539 MROH7-206ENST00000421030 4329 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
PCP4P48539 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 ESR1-208ENST00000443427 6357 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
PCP4P48539 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC9.5□□□□□ -0.89
PCP4P48539 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 LIFR-AS1-201ENST00000500733 3803 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 ARNT2-201ENST00000303329 6558 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
PCP4P48539 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 ABLIM3-205ENST00000504238 2774 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 RINT1-201ENST00000257700 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
PCP4P48539 ST13-201ENST00000216218 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 CHEK1-204ENST00000438015 4153 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
PCP4P48539 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
PCP4P48539 HSCB-202ENST00000398941 955 ntTSL 2 BASIC9.5□□□□□ -0.89
PCP4P48539 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 AC120057.1-201ENST00000483947 663 ntBASIC9.5□□□□□ -0.89
PCP4P48539 CIB2-204ENST00000557846 934 ntTSL 3 BASIC9.5□□□□□ -0.89
PCP4P48539 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC9.5□□□□□ -0.89
PCP4P48539 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 GON4L-202ENST00000361040 5118 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 CNTN2-232ENST00000640428 4146 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
PCP4P48539 KCNJ15-206ENST00000398932 2747 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
PCP4P48539 TTC12-201ENST00000314756 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PCP4P48539 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms