RNA–Protein interactions for RNA: ENST00000369905.8

ACTR1A-201, Transcript of ARP1 actin related protein 1 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR1A, Length 2,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1A-201ENST00000369905 NISCHQ9Y2I1 1504 aa24.43■■□□□ 1.5
ACTR1A-201ENST00000369905 SHROOM4Q9ULL8 1493 aa21.34■■□□□ 1.01
ACTR1A-201ENST00000369905 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
ACTR1A-201ENST00000369905 ZCCHC6Q5VYS8 1495 aaKnown RBP20.67■□□□□ 0.9
ACTR1A-201ENST00000369905 DCAF8L2P0C7V8 631 aa20.6■□□□□ 0.89
ACTR1A-201ENST00000369905 CCDC180Q9P1Z9 1646 aa20.46■□□□□ 0.87
ACTR1A-201ENST00000369905 MYO15BQ96JP2 1530 aa20.41■□□□□ 0.86
ACTR1A-201ENST00000369905 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
ACTR1A-201ENST00000369905 PCGF6Q9BYE7 350 aa20.06■□□□□ 0.8
ACTR1A-201ENST00000369905 HRCP23327 699 aa20.05■□□□□ 0.8
ACTR1A-201ENST00000369905 LOC105371045A0A1W2PR82 267 aa19.96■□□□□ 0.79
ACTR1A-201ENST00000369905 PPARGC1BQ86YN6 1023 aaKnown RBP19.86■□□□□ 0.77
ACTR1A-201ENST00000369905 DCAF1Q9Y4B6 1507 aa19.85■□□□□ 0.77
ACTR1A-201ENST00000369905 SCRIBQ14160 1630 aa19.52■□□□□ 0.72
ACTR1A-201ENST00000369905 ABCC9O60706 1549 aa19.52■□□□□ 0.71
ACTR1A-201ENST00000369905 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
ACTR1A-201ENST00000369905 FAM9AQ8IZU1 332 aaPredicted RBP19.46■□□□□ 0.71
ACTR1A-201ENST00000369905 TRIM26Q12899 539 aaPredicted RBP19.45■□□□□ 0.7
ACTR1A-201ENST00000369905 EHMT2Q96KQ7 1210 aa19.44■□□□□ 0.7
ACTR1A-201ENST00000369905 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
ACTR1A-201ENST00000369905 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
ACTR1A-201ENST00000369905 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
ACTR1A-201ENST00000369905 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
ACTR1A-201ENST00000369905 WIZO95785 1651 aa19.01■□□□□ 0.63
ACTR1A-201ENST00000369905 ZEB1P37275 1124 aaPredicted RBP18.96■□□□□ 0.63
ACTR1A-201ENST00000369905 NACADO15069 1562 aa18.95■□□□□ 0.62
ACTR1A-201ENST00000369905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.83■□□□□ 0.6
ACTR1A-201ENST00000369905 TTBK1Q5TCY1 1321 aaPredicted RBP18.82■□□□□ 0.6
ACTR1A-201ENST00000369905 BAZ1AQ9NRL2 1556 aaPredicted RBP18.75■□□□□ 0.59
ACTR1A-201ENST00000369905 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
ACTR1A-201ENST00000369905 EIF4G1Q04637 1599 aaKnown RBP18.71■□□□□ 0.59
ACTR1A-201ENST00000369905 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
ACTR1A-201ENST00000369905 CCDC88BA6NC98 1476 aa18.69■□□□□ 0.58
ACTR1A-201ENST00000369905 CCER1Q8TC90 406 aaPredicted RBP18.69■□□□□ 0.58
ACTR1A-201ENST00000369905 SOGA1O94964 1423 aa18.61■□□□□ 0.57
ACTR1A-201ENST00000369905 TOP2AP11388 1531 aaKnown RBP18.57■□□□□ 0.56
ACTR1A-201ENST00000369905 RUSC2Q8N2Y8 1516 aa18.55■□□□□ 0.56
ACTR1A-201ENST00000369905 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
ACTR1A-201ENST00000369905 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
ACTR1A-201ENST00000369905 CEP162Q5TB80 1403 aa18.53■□□□□ 0.56
ACTR1A-201ENST00000369905 PABPN1Q86U42 306 aaKnown RBP eCLIP18.53■□□□□ 0.56
ACTR1A-201ENST00000369905 UBTFP17480 764 aaKnown RBP18.5■□□□□ 0.55
ACTR1A-201ENST00000369905 CSRNP3Q8WYN3 585 aa18.46■□□□□ 0.55
ACTR1A-201ENST00000369905 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
ACTR1A-201ENST00000369905 WRNQ14191 1432 aaPredicted RBP eCLIP18.43■□□□□ 0.54
ACTR1A-201ENST00000369905 NEUROD1Q13562 356 aa18.43■□□□□ 0.54
ACTR1A-201ENST00000369905 TNIKQ9UKE5 1360 aa18.41■□□□□ 0.54
ACTR1A-201ENST00000369905 DIEXFQ68CQ4 756 aaKnown RBP18.41■□□□□ 0.54
ACTR1A-201ENST00000369905 ACIN1Q9UKV3 1341 aaKnown RBP18.36■□□□□ 0.53
ACTR1A-201ENST00000369905 RANGAP1P46060 587 aaPredicted RBP18.3■□□□□ 0.52
ACTR1A-201ENST00000369905 HNRNPUL2Q1KMD3 747 aaKnown RBP18.28■□□□□ 0.52
ACTR1A-201ENST00000369905 GOLGA3Q08378 1498 aa18.25■□□□□ 0.51
ACTR1A-201ENST00000369905 EEA1Q15075 1411 aa18.25■□□□□ 0.51
ACTR1A-201ENST00000369905 BICRAQ9NZM4 1560 aa18.24■□□□□ 0.51
ACTR1A-201ENST00000369905 GTF3C3Q9Y5Q9 886 aa18.24■□□□□ 0.51
ACTR1A-201ENST00000369905 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
ACTR1A-201ENST00000369905 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
ACTR1A-201ENST00000369905 ZNF316A6NFI3 1004 aaPredicted RBP18.18■□□□□ 0.5
ACTR1A-201ENST00000369905 YTHDC1Q96MU7 727 aaKnown RBP18.15■□□□□ 0.5
ACTR1A-201ENST00000369905 CLIP1P30622 1438 aa18.13■□□□□ 0.49
ACTR1A-201ENST00000369905 CENPBP07199 599 aaPredicted RBP18.13■□□□□ 0.49
ACTR1A-201ENST00000369905 CEP164Q9UPV0 1460 aa18.11■□□□□ 0.49
ACTR1A-201ENST00000369905 RAPGEF2Q9Y4G8 1499 aa18.1■□□□□ 0.49
ACTR1A-201ENST00000369905 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
ACTR1A-201ENST00000369905 PEG3Q9GZU2 1588 aa18.07■□□□□ 0.48
ACTR1A-201ENST00000369905 MIER1Q8N108 512 aa18.06■□□□□ 0.48
ACTR1A-201ENST00000369905 KIF21BO75037 1637 aa18.03■□□□□ 0.48
ACTR1A-201ENST00000369905 BAZ1BQ9UIG0 1483 aaKnown RBP18.03■□□□□ 0.48
ACTR1A-201ENST00000369905 VPS8Q8N3P4 1428 aa18.03■□□□□ 0.48
ACTR1A-201ENST00000369905 APLP2Q06481 763 aa18.02■□□□□ 0.48
ACTR1A-201ENST00000369905 KANK4Q5T7N3 995 aaPredicted RBP17.91■□□□□ 0.46
ACTR1A-201ENST00000369905 TOP2BQ02880 1626 aa17.85■□□□□ 0.45
ACTR1A-201ENST00000369905 ARAP1Q96P48 1450 aa17.81■□□□□ 0.44
ACTR1A-201ENST00000369905 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
ACTR1A-201ENST00000369905 PRXQ9BXM0 1461 aa17.79■□□□□ 0.44
ACTR1A-201ENST00000369905 ITGAEP38570 1179 aa17.77■□□□□ 0.44
ACTR1A-201ENST00000369905 CUX1P39880 1505 aa17.74■□□□□ 0.43
ACTR1A-201ENST00000369905 BIVM-ERCC5R4GMW8 1640 aa17.74■□□□□ 0.43
ACTR1A-201ENST00000369905 ERICH3Q5RHP9 1530 aa17.69■□□□□ 0.42
ACTR1A-201ENST00000369905 KIF27Q86VH2 1401 aa17.66■□□□□ 0.42
ACTR1A-201ENST00000369905 ARHGAP35Q9NRY4 1499 aa17.63■□□□□ 0.41
ACTR1A-201ENST00000369905 NCAPD3P42695 1498 aa17.62■□□□□ 0.41
ACTR1A-201ENST00000369905 CLSPNQ9HAW4 1339 aa17.62■□□□□ 0.41
ACTR1A-201ENST00000369905 RRBP1Q9P2E9 1410 aaKnown RBP17.61■□□□□ 0.41
ACTR1A-201ENST00000369905 CCNB3Q8WWL7 1395 aa17.6■□□□□ 0.41
ACTR1A-201ENST00000369905 CFTRP13569 1480 aa17.57■□□□□ 0.4
ACTR1A-201ENST00000369905 KCNH8Q96L42 1107 aa17.57■□□□□ 0.4
ACTR1A-201ENST00000369905 HMGXB3Q12766 1538 aa17.55■□□□□ 0.4
ACTR1A-201ENST00000369905 P3H3Q8IVL6 736 aa17.54■□□□□ 0.4
ACTR1A-201ENST00000369905 IGF1RP08069 1367 aa17.54■□□□□ 0.4
ACTR1A-201ENST00000369905 CUX2O14529 1486 aa17.53■□□□□ 0.4
ACTR1A-201ENST00000369905 RAB3GAP2Q9H2M9 1393 aa17.52■□□□□ 0.39
ACTR1A-201ENST00000369905 ATP1B4Q9UN42 357 aaPredicted RBP17.5■□□□□ 0.39
ACTR1A-201ENST00000369905 SIN3AQ96ST3 1273 aa17.48■□□□□ 0.39
ACTR1A-201ENST00000369905 SUPT16HQ9Y5B9 1047 aaKnown RBP17.48■□□□□ 0.39
ACTR1A-201ENST00000369905 FAM50AQ14320 339 aaKnown RBP17.47■□□□□ 0.39
ACTR1A-201ENST00000369905 CARMIL1Q5VZK9 1371 aa17.45■□□□□ 0.38
ACTR1A-201ENST00000369905 PHLDB1Q86UU1 1377 aa17.45■□□□□ 0.38
ACTR1A-201ENST00000369905 MAPKBP1O60336 1514 aa17.44■□□□□ 0.38
ACTR1A-201ENST00000369905 HIRIP3Q9BW71 556 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms