Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC007551.1-201ENST00000457394 519 ntBASIC14.74□□□□□ -0.05
APOA4P06727 FTH1P14-201ENST00000482930 551 ntBASIC14.74□□□□□ -0.05
APOA4P06727 RNA5SP486-201ENST00000515961 83 ntBASIC14.74□□□□□ -0.05
APOA4P06727 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOA4P06727 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.74□□□□□ -0.05
APOA4P06727 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.74□□□□□ -0.05
APOA4P06727 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.74□□□□□ -0.05
APOA4P06727 AC004466.1-201ENST00000599515 1080 ntBASIC14.74□□□□□ -0.05
APOA4P06727 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.74□□□□□ -0.05
APOA4P06727 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.74□□□□□ -0.05
APOA4P06727 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOA4P06727 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
APOA4P06727 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOA4P06727 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOA4P06727 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOA4P06727 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
APOA4P06727 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOA4P06727 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOA4P06727 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOA4P06727 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOA4P06727 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.74□□□□□ -0.05
APOA4P06727 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
APOA4P06727 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.74□□□□□ -0.05
APOA4P06727 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.73□□□□□ -0.05
APOA4P06727 AL136172.1-201ENST00000598590 1394 ntBASIC14.73□□□□□ -0.05
APOA4P06727 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
APOA4P06727 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
APOA4P06727 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.73□□□□□ -0.05
APOA4P06727 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
APOA4P06727 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
APOA4P06727 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.73□□□□□ -0.05
APOA4P06727 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
APOA4P06727 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.73□□□□□ -0.05
APOA4P06727 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.73□□□□□ -0.05
APOA4P06727 MESTP3-201ENST00000503460 968 ntBASIC14.73□□□□□ -0.05
APOA4P06727 FTLP10-202ENST00000505798 471 ntBASIC14.73□□□□□ -0.05
APOA4P06727 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.73□□□□□ -0.05
APOA4P06727 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.73□□□□□ -0.05
APOA4P06727 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.73□□□□□ -0.05
APOA4P06727 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.73□□□□□ -0.05
APOA4P06727 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
APOA4P06727 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.73□□□□□ -0.05
APOA4P06727 AC138466.3-201ENST00000619983 221 ntBASIC14.73□□□□□ -0.05
APOA4P06727 AL035252.4-201ENST00000624174 288 ntBASIC14.73□□□□□ -0.05
APOA4P06727 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.73□□□□□ -0.05
APOA4P06727 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.73□□□□□ -0.05
APOA4P06727 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
APOA4P06727 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
APOA4P06727 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
APOA4P06727 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 AC215219.1-201ENST00000400706 1817 ntBASIC14.73□□□□□ -0.05
APOA4P06727 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
APOA4P06727 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.73□□□□□ -0.05
APOA4P06727 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA4P06727 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
APOA4P06727 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.72□□□□□ -0.05
APOA4P06727 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 CLUHP2-201ENST00000426660 1303 ntBASIC14.72□□□□□ -0.05
APOA4P06727 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.72□□□□□ -0.05
APOA4P06727 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
APOA4P06727 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 AC003102.2-201ENST00000589195 1469 ntBASIC14.72□□□□□ -0.05
APOA4P06727 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOA4P06727 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
APOA4P06727 BOLA2P3-201ENST00000404566 256 ntBASIC14.72□□□□□ -0.05
APOA4P06727 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.72□□□□□ -0.05
APOA4P06727 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms