Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC21.24■□□□□ 0.99
HFM1A2PYH4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
HFM1A2PYH4 AC023908.3-201ENST00000564211 3047 ntBASIC21.24■□□□□ 0.99
HFM1A2PYH4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HFM1A2PYH4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HFM1A2PYH4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC21.23■□□□□ 0.99
HFM1A2PYH4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC21.23■□□□□ 0.99
HFM1A2PYH4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC21.23■□□□□ 0.99
HFM1A2PYH4 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC21.23■□□□□ 0.99
HFM1A2PYH4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC21.23■□□□□ 0.99
HFM1A2PYH4 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 RN7SL181P-201ENST00000462921 277 ntBASIC21.23■□□□□ 0.99
HFM1A2PYH4 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC21.23■□□□□ 0.99
HFM1A2PYH4 RN7SL81P-201ENST00000493781 261 ntBASIC21.23■□□□□ 0.99
HFM1A2PYH4 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC21.23■□□□□ 0.99
HFM1A2PYH4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC21.23■□□□□ 0.99
HFM1A2PYH4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC21.23■□□□□ 0.99
HFM1A2PYH4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HFM1A2PYH4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC21.23■□□□□ 0.99
HFM1A2PYH4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC21.23■□□□□ 0.99
HFM1A2PYH4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HFM1A2PYH4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HFM1A2PYH4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HFM1A2PYH4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HFM1A2PYH4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC21.22■□□□□ 0.99
HFM1A2PYH4 AL627231.1-201ENST00000394467 1125 ntBASIC21.22■□□□□ 0.99
HFM1A2PYH4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HFM1A2PYH4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC21.22■□□□□ 0.99
HFM1A2PYH4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC21.22■□□□□ 0.99
HFM1A2PYH4 AC008267.1-201ENST00000474858 1069 ntBASIC21.22■□□□□ 0.99
HFM1A2PYH4 AC130709.1-201ENST00000484779 1212 ntBASIC21.22■□□□□ 0.99
HFM1A2PYH4 ALG1L13P-202ENST00000519320 584 ntBASIC21.22■□□□□ 0.99
HFM1A2PYH4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC21.22■□□□□ 0.99
HFM1A2PYH4 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC21.22■□□□□ 0.99
HFM1A2PYH4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC21.22■□□□□ 0.99
HFM1A2PYH4 RPL13AP3-202ENST00000494676 1473 ntBASIC21.22■□□□□ 0.99
HFM1A2PYH4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HFM1A2PYH4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HFM1A2PYH4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HFM1A2PYH4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC21.22■□□□□ 0.99
HFM1A2PYH4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HFM1A2PYH4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HFM1A2PYH4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC21.22■□□□□ 0.99
HFM1A2PYH4 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC21.22■□□□□ 0.99
HFM1A2PYH4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 AC090643.2-201ENST00000623442 2029 ntBASIC21.21■□□□□ 0.99
HFM1A2PYH4 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 KRT8P43-201ENST00000406052 1458 ntBASIC21.21■□□□□ 0.99
HFM1A2PYH4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HFM1A2PYH4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC21.21■□□□□ 0.99
HFM1A2PYH4 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms