Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 DOC2GP-202ENST00000514950 1163 ntBASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 AP001582.1-201ENST00000525856 295 ntBASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 RARRES2P5-201ENST00000564013 466 ntBASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 KRT8P14-201ENST00000414254 1442 ntBASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GTF2A1LQ9UNN4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 SPDYE19P-201ENST00000338590 713 ntBASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 AL645937.2-201ENST00000396808 931 ntBASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 RN7SL399P-201ENST00000471648 279 ntBASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 AC026410.3-201ENST00000514280 936 ntBASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 AC023310.3-201ENST00000557027 670 ntBASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 AC100756.1-201ENST00000562736 682 ntBASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 AC138749.3-201ENST00000567691 622 ntBASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 AC116165.1-201ENST00000611806 668 ntBASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 AC106028.4-201ENST00000614509 607 ntBASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 AC093512.1-201ENST00000617969 520 ntBASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC13.18□□□□□ -0.3
GTF2A1LQ9UNN4 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GTF2A1LQ9UNN4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GTF2A1LQ9UNN4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
GTF2A1LQ9UNN4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.17□□□□□ -0.3
GTF2A1LQ9UNN4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GTF2A1LQ9UNN4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms