Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
MKS1Q9NXB0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.47□□□□□ -0.09
MKS1Q9NXB0 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.47□□□□□ -0.09
MKS1Q9NXB0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MKS1Q9NXB0 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MKS1Q9NXB0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.47□□□□□ -0.09
MKS1Q9NXB0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
MKS1Q9NXB0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MKS1Q9NXB0 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
MKS1Q9NXB0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
MKS1Q9NXB0 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 COL6A4P2-202ENST00000504443 2753 ntBASIC14.46□□□□□ -0.09
MKS1Q9NXB0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 FKBP4P6-201ENST00000457486 1332 ntBASIC14.46□□□□□ -0.09
MKS1Q9NXB0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.46□□□□□ -0.09
MKS1Q9NXB0 AC136604.1-202ENST00000425471 771 ntBASIC14.46□□□□□ -0.09
MKS1Q9NXB0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.46□□□□□ -0.09
MKS1Q9NXB0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 TMEM261P1-201ENST00000604899 340 ntBASIC14.46□□□□□ -0.09
MKS1Q9NXB0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKS1Q9NXB0 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
MKS1Q9NXB0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.46□□□□□ -0.1
MKS1Q9NXB0 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
MKS1Q9NXB0 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
MKS1Q9NXB0 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
MKS1Q9NXB0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.46□□□□□ -0.1
MKS1Q9NXB0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.46□□□□□ -0.1
MKS1Q9NXB0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MKS1Q9NXB0 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
MKS1Q9NXB0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.46□□□□□ -0.1
MKS1Q9NXB0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 MKRN5P-201ENST00000445263 1467 ntBASIC14.45□□□□□ -0.1
MKS1Q9NXB0 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 AL391280.1-201ENST00000506969 1062 ntBASIC14.45□□□□□ -0.1
MKS1Q9NXB0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 ENPP7P14-201ENST00000621765 1040 ntBASIC14.45□□□□□ -0.1
MKS1Q9NXB0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms