Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNMTL1P1-201ENST00000454103 560 ntBASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 AC003686.1-201ENST00000550956 1034 ntBASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 AC009884.2-201ENST00000603110 324 ntBASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 AL033527.4-201ENST00000641026 673 ntBASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
BLOC1S4Q9NUP1 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
BLOC1S4Q9NUP1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
BLOC1S4Q9NUP1 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
BLOC1S4Q9NUP1 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
BLOC1S4Q9NUP1 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
BLOC1S4Q9NUP1 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
BLOC1S4Q9NUP1 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.21■□□□□ 0.18
BLOC1S4Q9NUP1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 RPL18P13-201ENST00000478088 569 ntBASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 SCARNA21-201ENST00000517026 139 ntBASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
BLOC1S4Q9NUP1 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 AC005840.4-201ENST00000541242 2494 ntBASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 KRT8P24-201ENST00000560290 1559 ntBASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 FAM90A7P-201ENST00000382628 1395 ntBASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 FAM90A23P-201ENST00000400136 1395 ntBASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 KRT8P29-201ENST00000420409 1371 ntBASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 HLA-J-204ENST00000495278 958 ntBASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 BNIP3P13-201ENST00000599968 566 ntBASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 AL359881.2-201ENST00000602973 570 ntBASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.19■□□□□ 0.18
BLOC1S4Q9NUP1 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms