Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VAT1LQ9HCJ6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 AL133338.1-201ENST00000565695 1517 ntBASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 BCYRN1-201ENST00000418539 200 ntBASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 HLA-J-204ENST00000495278 958 ntBASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 AC013355.1-201ENST00000562625 723 ntBASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 SNORD3B-2-202ENST00000571722 791 ntBASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 AL139099.5-201ENST00000635274 300 ntBASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAT1LQ9HCJ6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 AC144522.1-201ENST00000625111 1658 ntBASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 KHSRPP1-201ENST00000427983 1768 ntBASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 CALR4P-201ENST00000431943 946 ntBASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 RBM8B-201ENST00000555532 525 ntBASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 AC097359.2-201ENST00000604992 2389 ntBASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.97■□□□□ 0.31
VAT1LQ9HCJ6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms