Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDH20Q9HBT6 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CDH20Q9HBT6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.9□□□□□ -0.35
CDH20Q9HBT6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 INE2-201ENST00000630399 1874 ntBASIC12.89□□□□□ -0.35
CDH20Q9HBT6 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 AC087386.2-201ENST00000623212 4637 ntBASIC12.89□□□□□ -0.35
CDH20Q9HBT6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 GCOM2-201ENST00000509133 1104 ntBASIC12.89□□□□□ -0.35
CDH20Q9HBT6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 AL008721.1-201ENST00000609964 604 ntBASIC12.89□□□□□ -0.35
CDH20Q9HBT6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 FP325330.2-201ENST00000624219 5630 ntBASIC12.89□□□□□ -0.35
CDH20Q9HBT6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDH20Q9HBT6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 MTHFR-210ENST00000641407 2387 ntBASIC12.88□□□□□ -0.35
CDH20Q9HBT6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.88□□□□□ -0.35
CDH20Q9HBT6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms