Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 TFAMP1-201ENST00000412727 736 ntBASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 AF186996.4-201ENST00000467186 377 ntBASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 AL121723.1-201ENST00000445194 1519 ntBASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 MKRN5P-201ENST00000445263 1467 ntBASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 KRT18P67-201ENST00000432816 1264 ntBASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 AL645937.6-201ENST00000641122 3727 ntBASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 DLX4-206ENST00000611342 1662 ntBASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC12.44□□□□□ -0.42
SEC22CQ9BRL7 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms