Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL354877.1-201ENST00000424412 413 ntBASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 AC006033.1-201ENST00000440505 426 ntBASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 GCOM2-201ENST00000509133 1104 ntBASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 AC131206.1-201ENST00000538078 1211 ntBASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 AL022328.3-201ENST00000607943 679 ntBASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 SHC1P1-201ENST00000425230 1745 ntBASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 AL365209.1-201ENST00000624418 6473 ntBASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFWD3Q6PCD5 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 AC018442.1-201ENST00000421439 2061 ntBASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.32■□□□□ 0.04
RFWD3Q6PCD5 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 MBLAC2-202ENST00000514906 1936 ntBASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 POM121L10P-201ENST00000436994 1285 ntBASIC15.31■□□□□ 0.04
RFWD3Q6PCD5 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms