Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
REEP3Q6NUK4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
REEP3Q6NUK4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
REEP3Q6NUK4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 AC134312.5-201ENST00000568031 1313 ntBASIC13.7□□□□□ -0.22
REEP3Q6NUK4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 AC012441.1-201ENST00000446669 685 ntBASIC13.7□□□□□ -0.22
REEP3Q6NUK4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 LINC02560-201ENST00000596379 459 ntBASIC13.7□□□□□ -0.22
REEP3Q6NUK4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 AP000593.2-201ENST00000542775 1433 ntBASIC13.7□□□□□ -0.22
REEP3Q6NUK4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
REEP3Q6NUK4 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 AC130686.1-201ENST00000622936 2466 ntBASIC13.69□□□□□ -0.22
REEP3Q6NUK4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 PTP4A1P2-201ENST00000546033 454 ntBASIC13.69□□□□□ -0.22
REEP3Q6NUK4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.69□□□□□ -0.22
REEP3Q6NUK4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms