Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC015818.8-201ENST00000587907 1519 ntBASIC15.45■□□□□ 0.06
RNF43Q68DV7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 AL136309.1-201ENST00000403917 691 ntBASIC15.45■□□□□ 0.06
RNF43Q68DV7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 MTX1P1-201ENST00000440904 838 ntBASIC15.45■□□□□ 0.06
RNF43Q68DV7 HOMER2P2-201ENST00000451621 847 ntBASIC15.45■□□□□ 0.06
RNF43Q68DV7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 AP006547.1-201ENST00000563435 692 ntBASIC15.45■□□□□ 0.06
RNF43Q68DV7 OR10B1P-201ENST00000601666 907 ntBASIC15.45■□□□□ 0.06
RNF43Q68DV7 U62317.3-201ENST00000608319 855 ntBASIC15.45■□□□□ 0.06
RNF43Q68DV7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 AL023775.1-201ENST00000454907 1746 ntBASIC15.45■□□□□ 0.06
RNF43Q68DV7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 AP001267.2-201ENST00000532619 2086 ntBASIC15.45■□□□□ 0.06
RNF43Q68DV7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 RN7SKP175-201ENST00000408472 289 ntBASIC15.44■□□□□ 0.06
RNF43Q68DV7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 RPSAP36-202ENST00000494591 1261 ntBASIC15.44■□□□□ 0.06
RNF43Q68DV7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 AC104982.3-201ENST00000581995 514 ntBASIC15.44■□□□□ 0.06
RNF43Q68DV7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RNF43Q68DV7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF43Q68DV7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 AL138725.1-201ENST00000407347 1314 ntBASIC15.43■□□□□ 0.06
RNF43Q68DV7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms