Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH15P55291 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.78□□□□□ -0.2
CDH15P55291 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CDH15P55291 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CDH15P55291 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH15P55291 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH15P55291 RN7SL832P-201ENST00000607781 1756 ntBASIC13.78□□□□□ -0.2
CDH15P55291 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.78□□□□□ -0.2
CDH15P55291 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CDH15P55291 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.78□□□□□ -0.2
CDH15P55291 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH15P55291 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CDH15P55291 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH15P55291 CICP1-201ENST00000416803 2410 ntBASIC13.78□□□□□ -0.2
CDH15P55291 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDH15P55291 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.77□□□□□ -0.2
CDH15P55291 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CDH15P55291 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDH15P55291 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CDH15P55291 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CDH15P55291 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH15P55291 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CDH15P55291 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CDH15P55291 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH15P55291 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 FAM207CP-201ENST00000443486 507 ntBASIC13.77□□□□□ -0.21
CDH15P55291 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH15P55291 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH15P55291 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.77□□□□□ -0.21
CDH15P55291 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.77□□□□□ -0.21
CDH15P55291 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH15P55291 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH15P55291 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH15P55291 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH15P55291 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH15P55291 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CDH15P55291 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH15P55291 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CDH15P55291 AC090643.2-201ENST00000623442 2029 ntBASIC13.77□□□□□ -0.21
CDH15P55291 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH15P55291 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH15P55291 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH15P55291 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDH15P55291 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDH15P55291 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH15P55291 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH15P55291 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
CDH15P55291 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH15P55291 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH15P55291 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CDH15P55291 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH15P55291 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH15P55291 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH15P55291 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH15P55291 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH15P55291 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH15P55291 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH15P55291 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH15P55291 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.76□□□□□ -0.21
CDH15P55291 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH15P55291 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH15P55291 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH15P55291 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CDH15P55291 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH15P55291 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDH15P55291 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH15P55291 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH15P55291 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH15P55291 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH15P55291 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms