Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 RPL17P11-201ENST00000417593 544 ntBASIC18.61■□□□□ 0.57
BRPF1P55201 POM121L10P-201ENST00000436994 1285 ntBASIC18.61■□□□□ 0.57
BRPF1P55201 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.61■□□□□ 0.57
BRPF1P55201 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.61■□□□□ 0.57
BRPF1P55201 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.61■□□□□ 0.57
BRPF1P55201 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.61■□□□□ 0.57
BRPF1P55201 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
BRPF1P55201 AC005730.2-201ENST00000564549 1184 ntBASIC18.61■□□□□ 0.57
BRPF1P55201 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.61■□□□□ 0.57
BRPF1P55201 BNIP3P13-201ENST00000599968 566 ntBASIC18.61■□□□□ 0.57
BRPF1P55201 AC009884.2-201ENST00000603110 324 ntBASIC18.61■□□□□ 0.57
BRPF1P55201 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.61■□□□□ 0.57
BRPF1P55201 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.61■□□□□ 0.57
BRPF1P55201 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
BRPF1P55201 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BRPF1P55201 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC18.61■□□□□ 0.57
BRPF1P55201 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC18.61■□□□□ 0.57
BRPF1P55201 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BRPF1P55201 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC18.61■□□□□ 0.57
BRPF1P55201 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
BRPF1P55201 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
BRPF1P55201 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRPF1P55201 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRPF1P55201 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.6■□□□□ 0.57
BRPF1P55201 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BRPF1P55201 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.6■□□□□ 0.57
BRPF1P55201 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRPF1P55201 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRPF1P55201 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC18.6■□□□□ 0.57
BRPF1P55201 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.6■□□□□ 0.57
BRPF1P55201 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
BRPF1P55201 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.6■□□□□ 0.57
BRPF1P55201 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.6■□□□□ 0.57
BRPF1P55201 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.6■□□□□ 0.57
BRPF1P55201 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.6■□□□□ 0.57
BRPF1P55201 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
BRPF1P55201 AC006122.1-201ENST00000493323 440 ntBASIC18.6■□□□□ 0.57
BRPF1P55201 HLA-J-204ENST00000495278 958 ntBASIC18.6■□□□□ 0.57
BRPF1P55201 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.6■□□□□ 0.57
BRPF1P55201 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC18.6■□□□□ 0.57
BRPF1P55201 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRPF1P55201 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.6■□□□□ 0.57
BRPF1P55201 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.6■□□□□ 0.57
BRPF1P55201 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.6■□□□□ 0.57
BRPF1P55201 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRPF1P55201 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRPF1P55201 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.6■□□□□ 0.57
BRPF1P55201 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BRPF1P55201 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRPF1P55201 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRPF1P55201 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC18.6■□□□□ 0.57
BRPF1P55201 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRPF1P55201 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
BRPF1P55201 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC18.6■□□□□ 0.57
BRPF1P55201 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRPF1P55201 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BRPF1P55201 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRPF1P55201 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC18.6■□□□□ 0.57
BRPF1P55201 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BRPF1P55201 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC18.59■□□□□ 0.57
BRPF1P55201 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRPF1P55201 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRPF1P55201 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRPF1P55201 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.59■□□□□ 0.57
BRPF1P55201 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRPF1P55201 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
BRPF1P55201 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRPF1P55201 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRPF1P55201 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRPF1P55201 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC18.59■□□□□ 0.57
BRPF1P55201 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
BRPF1P55201 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.59■□□□□ 0.57
BRPF1P55201 C8orf49-201ENST00000525043 1968 ntBASIC18.59■□□□□ 0.57
BRPF1P55201 FAM90A7P-201ENST00000382628 1395 ntBASIC18.59■□□□□ 0.57
BRPF1P55201 FAM90A23P-201ENST00000400136 1395 ntBASIC18.59■□□□□ 0.57
BRPF1P55201 KRT8P29-201ENST00000420409 1371 ntBASIC18.59■□□□□ 0.57
BRPF1P55201 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.59■□□□□ 0.57
BRPF1P55201 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRPF1P55201 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRPF1P55201 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
BRPF1P55201 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRPF1P55201 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRPF1P55201 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
BRPF1P55201 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRPF1P55201 KRT18P36-201ENST00000411618 1276 ntBASIC18.59■□□□□ 0.57
BRPF1P55201 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC18.59■□□□□ 0.57
BRPF1P55201 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms