Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 OR2I1P-210ENST00000642037 4691 ntBASIC12.62□□□□□ -0.39
CD40P25942 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.62□□□□□ -0.39
CD40P25942 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
CD40P25942 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.62□□□□□ -0.39
CD40P25942 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.62□□□□□ -0.39
CD40P25942 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.62□□□□□ -0.39
CD40P25942 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.62□□□□□ -0.39
CD40P25942 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CD40P25942 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.62□□□□□ -0.39
CD40P25942 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.62□□□□□ -0.39
CD40P25942 KRT8P21-201ENST00000430398 1491 ntBASIC12.62□□□□□ -0.39
CD40P25942 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.62□□□□□ -0.39
CD40P25942 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CD40P25942 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.62□□□□□ -0.39
CD40P25942 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.62□□□□□ -0.39
CD40P25942 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 AL596276.2-201ENST00000447525 331 ntBASIC12.62□□□□□ -0.39
CD40P25942 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.62□□□□□ -0.39
CD40P25942 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.62□□□□□ -0.39
CD40P25942 AC097724.1-201ENST00000609581 426 ntBASIC12.62□□□□□ -0.39
CD40P25942 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.62□□□□□ -0.39
CD40P25942 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.62□□□□□ -0.39
CD40P25942 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.62□□□□□ -0.39
CD40P25942 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.62□□□□□ -0.39
CD40P25942 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD40P25942 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CD40P25942 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.61□□□□□ -0.39
CD40P25942 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.61□□□□□ -0.39
CD40P25942 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.61□□□□□ -0.39
CD40P25942 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.61□□□□□ -0.39
CD40P25942 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.61□□□□□ -0.39
CD40P25942 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 ISCA2P1-201ENST00000425548 448 ntBASIC12.61□□□□□ -0.39
CD40P25942 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.61□□□□□ -0.39
CD40P25942 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 XBP1P1-201ENST00000436573 652 ntBASIC12.61□□□□□ -0.39
CD40P25942 RN7SL769P-201ENST00000469386 295 ntBASIC12.61□□□□□ -0.39
CD40P25942 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 RN7SL720P-201ENST00000488178 304 ntBASIC12.61□□□□□ -0.39
CD40P25942 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 NUP210P1-202ENST00000504322 710 ntBASIC12.61□□□□□ -0.39
CD40P25942 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.61□□□□□ -0.39
CD40P25942 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.61□□□□□ -0.39
CD40P25942 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.61□□□□□ -0.39
CD40P25942 RHOQP1-201ENST00000555758 579 ntBASIC12.61□□□□□ -0.39
CD40P25942 CHMP4BP1-201ENST00000556017 588 ntBASIC12.61□□□□□ -0.39
CD40P25942 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.61□□□□□ -0.39
CD40P25942 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.61□□□□□ -0.39
CD40P25942 AL157813.1-201ENST00000612996 587 ntBASIC12.61□□□□□ -0.39
CD40P25942 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CD40P25942 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.61□□□□□ -0.39
CD40P25942 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.61□□□□□ -0.39
CD40P25942 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 AC018629.1-201ENST00000623381 1736 ntBASIC12.61□□□□□ -0.39
CD40P25942 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CD40P25942 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms