Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.34■□□□□ 0.05
RB1P06400 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RB1P06400 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.34■□□□□ 0.05
RB1P06400 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RB1P06400 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RB1P06400 AL162727.3-201ENST00000635661 2787 ntBASIC15.34■□□□□ 0.05
RB1P06400 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RB1P06400 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RB1P06400 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RB1P06400 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RB1P06400 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RB1P06400 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
RB1P06400 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RB1P06400 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RB1P06400 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.33■□□□□ 0.05
RB1P06400 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
RB1P06400 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RB1P06400 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.33■□□□□ 0.05
RB1P06400 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RB1P06400 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 KRT17P4-201ENST00000429445 819 ntBASIC15.33■□□□□ 0.04
RB1P06400 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.33■□□□□ 0.04
RB1P06400 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 PPIA-208ENST00000489459 907 ntTSL 2 BASIC15.33■□□□□ 0.04
RB1P06400 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.33■□□□□ 0.04
RB1P06400 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.33■□□□□ 0.04
RB1P06400 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.33■□□□□ 0.04
RB1P06400 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RB1P06400 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
RB1P06400 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.33■□□□□ 0.04
RB1P06400 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RB1P06400 AP005212.2-201ENST00000584979 510 ntBASIC15.33■□□□□ 0.04
RB1P06400 PPIA-210ENST00000620047 827 ntTSL 5 BASIC15.33■□□□□ 0.04
RB1P06400 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.33■□□□□ 0.04
RB1P06400 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.33■□□□□ 0.04
RB1P06400 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RB1P06400 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RB1P06400 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.33■□□□□ 0.04
RB1P06400 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.33■□□□□ 0.04
RB1P06400 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RB1P06400 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
RB1P06400 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC15.33■□□□□ 0.04
RB1P06400 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.33■□□□□ 0.04
RB1P06400 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.33■□□□□ 0.04
RB1P06400 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RB1P06400 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.32■□□□□ 0.04
RB1P06400 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.32■□□□□ 0.04
RB1P06400 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RB1P06400 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.32■□□□□ 0.04
RB1P06400 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RB1P06400 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.32■□□□□ 0.04
RB1P06400 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RB1P06400 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC15.32■□□□□ 0.04
RB1P06400 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.32■□□□□ 0.04
RB1P06400 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.32■□□□□ 0.04
RB1P06400 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 RN7SL494P-201ENST00000461517 304 ntBASIC15.32■□□□□ 0.04
RB1P06400 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.32■□□□□ 0.04
RB1P06400 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.32■□□□□ 0.04
RB1P06400 FAM86KP-201ENST00000509817 987 ntBASIC15.32■□□□□ 0.04
RB1P06400 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.32■□□□□ 0.04
RB1P06400 NDUFB10P1-201ENST00000567319 521 ntBASIC15.32■□□□□ 0.04
RB1P06400 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.32■□□□□ 0.04
RB1P06400 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.32■□□□□ 0.04
RB1P06400 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.32■□□□□ 0.04
RB1P06400 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.32■□□□□ 0.04
RB1P06400 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms