Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 AP005482.1-201ENST00000563722 1273 ntBASIC13.08□□□□□ -0.32
TRAF3IP2O43734 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 AC133552.6-201ENST00000613406 534 ntBASIC13.08□□□□□ -0.32
TRAF3IP2O43734 COX11-210ENST00000639671 696 ntBASIC13.08□□□□□ -0.32
TRAF3IP2O43734 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAF3IP2O43734 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 C8orf49-201ENST00000525043 1968 ntBASIC13.07□□□□□ -0.32
TRAF3IP2O43734 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 LINC01230-201ENST00000625222 3017 ntBASIC13.07□□□□□ -0.32
TRAF3IP2O43734 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 AC244107.1-201ENST00000442033 332 ntBASIC13.07□□□□□ -0.32
TRAF3IP2O43734 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 KRT223P-202ENST00000449164 1292 ntBASIC13.07□□□□□ -0.32
TRAF3IP2O43734 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 IGHV3-71-201ENST00000523324 359 ntBASIC13.07□□□□□ -0.32
TRAF3IP2O43734 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 AC027237.1-201ENST00000560942 655 ntBASIC13.07□□□□□ -0.32
TRAF3IP2O43734 DUX4L45-201ENST00000566406 1057 ntBASIC13.07□□□□□ -0.32
TRAF3IP2O43734 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 MIR4259-201ENST00000584466 101 ntBASIC13.07□□□□□ -0.32
TRAF3IP2O43734 AC132192.2-201ENST00000596206 1147 ntBASIC13.07□□□□□ -0.32
TRAF3IP2O43734 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 AC017083.2-201ENST00000608069 979 ntBASIC13.07□□□□□ -0.32
TRAF3IP2O43734 MIR6805-201ENST00000615055 62 ntBASIC13.07□□□□□ -0.32
TRAF3IP2O43734 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAF3IP2O43734 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms