Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRAPPC1Q9Y5R8 CSPG4P13-202ENST00000567704 4801 ntBASIC11.14□□□□□ -0.63
TRAPPC1Q9Y5R8 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRAPPC1Q9Y5R8 ALK-205ENST00000618119 4646 ntTSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 LPO-204ENST00000543544 2350 ntTSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AGGF1P10-201ENST00000635005 2191 ntBASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AC008667.4-201ENST00000607370 168 ntBASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.13□□□□□ -0.63
TRAPPC1Q9Y5R8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 AC005332.1-201ENST00000577698 1310 ntBASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.12□□□□□ -0.63
TRAPPC1Q9Y5R8 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms