Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL137783.1-201ENST00000623494 1896 ntBASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 FAM45BP-202ENST00000592932 1624 ntBASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 AL354877.1-201ENST00000424412 413 ntBASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 MIR4683-201ENST00000579659 81 ntBASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NPIPA1Q9UND3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 AC232323.1-201ENST00000540724 2099 ntBASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 AC005740.2-201ENST00000511085 419 ntBASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 AL136301.1-201ENST00000615830 422 ntBASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA1Q9UND3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms