Protein–RNA interactions for Protein: Q9P2K6

KLHL42, Kelch-like protein 42, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42Q9P2K6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KLHL42Q9P2K6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.3□□□□□ -0.12
KLHL42Q9P2K6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
KLHL42Q9P2K6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KLHL42Q9P2K6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 AC015656.1-201ENST00000624209 3578 ntBASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 USP17L6P-201ENST00000382470 1197 ntBASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KLHL42Q9P2K6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 AC139749.1-202ENST00000617529 3139 ntBASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 AL161772.1-201ENST00000610494 4412 ntBASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 HSPB1P2-201ENST00000448722 546 ntBASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
KLHL42Q9P2K6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms