Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 CCL25-202ENST00000315626 450 ntTSL 2 BASIC18.71■□□□□ 0.59
ABCA3Q99758 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ABCA3Q99758 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC18.71■□□□□ 0.59
ABCA3Q99758 CCND3P2-201ENST00000579393 537 ntBASIC18.71■□□□□ 0.59
ABCA3Q99758 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC18.71■□□□□ 0.59
ABCA3Q99758 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ABCA3Q99758 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ABCA3Q99758 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 AGAP7P-201ENST00000582299 2062 ntBASIC18.71■□□□□ 0.59
ABCA3Q99758 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 AGAP14-201ENST00000624701 2060 ntBASIC18.71■□□□□ 0.59
ABCA3Q99758 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC18.71■□□□□ 0.59
ABCA3Q99758 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.71■□□□□ 0.59
ABCA3Q99758 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
ABCA3Q99758 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ABCA3Q99758 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC18.71■□□□□ 0.59
ABCA3Q99758 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC18.71■□□□□ 0.59
ABCA3Q99758 TPT1P6-201ENST00000458298 514 ntBASIC18.71■□□□□ 0.59
ABCA3Q99758 HNRNPA1P56-201ENST00000505767 954 ntBASIC18.71■□□□□ 0.59
ABCA3Q99758 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC18.71■□□□□ 0.59
ABCA3Q99758 SRPK2P-201ENST00000523408 1100 ntBASIC18.71■□□□□ 0.59
ABCA3Q99758 MIR8071-1-201ENST00000616769 65 ntBASIC18.71■□□□□ 0.59
ABCA3Q99758 MIR8071-2-201ENST00000616772 65 ntBASIC18.71■□□□□ 0.59
ABCA3Q99758 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA3Q99758 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.71■□□□□ 0.58
ABCA3Q99758 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.7■□□□□ 0.58
ABCA3Q99758 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ABCA3Q99758 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ABCA3Q99758 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCA3Q99758 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC18.7■□□□□ 0.58
ABCA3Q99758 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCA3Q99758 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.7■□□□□ 0.58
ABCA3Q99758 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC18.7■□□□□ 0.58
ABCA3Q99758 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCA3Q99758 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ABCA3Q99758 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC18.7■□□□□ 0.58
ABCA3Q99758 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC18.7■□□□□ 0.58
ABCA3Q99758 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC18.7■□□□□ 0.58
ABCA3Q99758 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC18.7■□□□□ 0.58
ABCA3Q99758 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC18.7■□□□□ 0.58
ABCA3Q99758 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC18.7■□□□□ 0.58
ABCA3Q99758 AC048382.6-201ENST00000621980 1223 ntBASIC18.7■□□□□ 0.58
ABCA3Q99758 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
ABCA3Q99758 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC18.7■□□□□ 0.58
ABCA3Q99758 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.7■□□□□ 0.58
ABCA3Q99758 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ABCA3Q99758 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCA3Q99758 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC18.7■□□□□ 0.58
ABCA3Q99758 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ABCA3Q99758 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC18.7■□□□□ 0.58
ABCA3Q99758 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCA3Q99758 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ABCA3Q99758 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ABCA3Q99758 MIR632-201ENST00000385193 94 ntBASIC18.69■□□□□ 0.58
ABCA3Q99758 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 FAM197Y6-201ENST00000420524 766 ntBASIC18.69■□□□□ 0.58
ABCA3Q99758 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC18.69■□□□□ 0.58
ABCA3Q99758 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC18.69■□□□□ 0.58
ABCA3Q99758 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC18.69■□□□□ 0.58
ABCA3Q99758 GRAMD4P6-201ENST00000556999 244 ntBASIC18.69■□□□□ 0.58
ABCA3Q99758 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ABCA3Q99758 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC18.69■□□□□ 0.58
ABCA3Q99758 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.69■□□□□ 0.58
ABCA3Q99758 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC18.69■□□□□ 0.58
ABCA3Q99758 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ABCA3Q99758 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.69■□□□□ 0.58
ABCA3Q99758 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC18.69■□□□□ 0.58
ABCA3Q99758 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC18.69■□□□□ 0.58
ABCA3Q99758 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC18.69■□□□□ 0.58
ABCA3Q99758 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC18.69■□□□□ 0.58
ABCA3Q99758 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC18.69■□□□□ 0.58
ABCA3Q99758 RN7SL173P-201ENST00000461853 292 ntBASIC18.69■□□□□ 0.58
ABCA3Q99758 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA3Q99758 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms