Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 AC011498.7-201ENST00000624986 2027 ntBASIC13.78□□□□□ -0.2
NUP43Q8NFH3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
NUP43Q8NFH3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
NUP43Q8NFH3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
NUP43Q8NFH3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NUP43Q8NFH3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NUP43Q8NFH3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
NUP43Q8NFH3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NUP43Q8NFH3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
NUP43Q8NFH3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NUP43Q8NFH3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
NUP43Q8NFH3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.77□□□□□ -0.2
NUP43Q8NFH3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
NUP43Q8NFH3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NUP43Q8NFH3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 AC006001.1-201ENST00000325130 474 ntBASIC13.77□□□□□ -0.21
NUP43Q8NFH3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 MIR1202-201ENST00000408529 83 ntBASIC13.77□□□□□ -0.21
NUP43Q8NFH3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 ARSEP1-201ENST00000420443 635 ntBASIC13.77□□□□□ -0.21
NUP43Q8NFH3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 AC005225.4-201ENST00000557330 545 ntBASIC13.77□□□□□ -0.21
NUP43Q8NFH3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NUP43Q8NFH3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 CR383656.12-201ENST00000549567 513 ntBASIC13.76□□□□□ -0.21
NUP43Q8NFH3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms