Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 SPDYE19P-201ENST00000338590 713 ntBASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 AC114501.2-201ENST00000439631 535 ntBASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 TMEM198B-204ENST00000484016 896 ntBASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 AC104794.3-201ENST00000566840 1248 ntBASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 AC137695.1-201ENST00000604126 489 ntBASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 AC004840.1-201ENST00000636359 365 ntBASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 AL109936.8-201ENST00000641772 604 ntBASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.82□□□□□ -0.2
DEPDC4Q8N2C3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 TCAM1P-207ENST00000485295 1537 ntBASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 KRT18P43-201ENST00000469825 1281 ntBASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 TPRX2P-201ENST00000535362 881 ntBASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 AC005225.4-201ENST00000557330 545 ntBASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 AC140912.1-201ENST00000577171 1054 ntBASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 AL360270.3-201ENST00000609118 1348 ntBASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
DEPDC4Q8N2C3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DEPDC4Q8N2C3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DEPDC4Q8N2C3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DEPDC4Q8N2C3 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.8□□□□□ -0.2
DEPDC4Q8N2C3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DEPDC4Q8N2C3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.8□□□□□ -0.2
DEPDC4Q8N2C3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DEPDC4Q8N2C3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DEPDC4Q8N2C3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DEPDC4Q8N2C3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.8□□□□□ -0.2
DEPDC4Q8N2C3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.8□□□□□ -0.2
DEPDC4Q8N2C3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms