Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 FAM197Y7-201ENST00000432892 766 ntBASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 HMGN1P19-201ENST00000436976 333 ntBASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 INE1-201ENST00000456273 945 ntBASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 AC008735.3-201ENST00000596646 500 ntBASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKL3Q8IVW4 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 AC126335.2-201ENST00000623362 4637 ntBASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 AL512384.1-201ENST00000406683 331 ntBASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 CD8B2-202ENST00000417670 633 ntBASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 ARSEP1-201ENST00000420443 635 ntBASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 FTH1P14-201ENST00000482930 551 ntBASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 AP003171.2-201ENST00000528208 925 ntBASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 AC138951.2-201ENST00000623455 1161 ntBASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 AL358472.5-202ENST00000641448 1267 ntBASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 KRT8P28-201ENST00000433288 1390 ntBASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.1■□□□□ 0.01
CDKL3Q8IVW4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDKL3Q8IVW4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDKL3Q8IVW4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CDKL3Q8IVW4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.09■□□□□ 0.01
CDKL3Q8IVW4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDKL3Q8IVW4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.09■□□□□ 0.01
CDKL3Q8IVW4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDKL3Q8IVW4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.09■□□□□ 0.01
CDKL3Q8IVW4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDKL3Q8IVW4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDKL3Q8IVW4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDKL3Q8IVW4 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms