Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf88Q6PI97 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 AC105206.1-202ENST00000314927 2368 ntBASIC12.94□□□□□ -0.34
C11orf88Q6PI97 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 AC018442.1-201ENST00000421439 2061 ntBASIC12.94□□□□□ -0.34
C11orf88Q6PI97 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 RN7SL204P-201ENST00000582831 262 ntBASIC12.94□□□□□ -0.34
C11orf88Q6PI97 LINC02560-201ENST00000596379 459 ntBASIC12.94□□□□□ -0.34
C11orf88Q6PI97 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 CETN4P-206ENST00000642099 2168 ntBASIC12.94□□□□□ -0.34
C11orf88Q6PI97 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
C11orf88Q6PI97 AC023090.2-201ENST00000625182 2110 ntBASIC12.94□□□□□ -0.34
C11orf88Q6PI97 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 PIN1P1-201ENST00000412108 996 ntBASIC12.93□□□□□ -0.34
C11orf88Q6PI97 AC092580.3-201ENST00000430932 139 ntBASIC12.93□□□□□ -0.34
C11orf88Q6PI97 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.93□□□□□ -0.34
C11orf88Q6PI97 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms