Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 TOMM22P5-201ENST00000416399 439 ntBASIC11.76□□□□□ -0.53
FAM78BQ5VT40 TSEN15P1-201ENST00000423257 515 ntBASIC11.76□□□□□ -0.53
FAM78BQ5VT40 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 RPL13P2-201ENST00000440687 659 ntBASIC11.76□□□□□ -0.53
FAM78BQ5VT40 HLA-J-203ENST00000494367 1087 ntBASIC11.76□□□□□ -0.53
FAM78BQ5VT40 AC069262.1-201ENST00000539058 672 ntBASIC11.76□□□□□ -0.53
FAM78BQ5VT40 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 AC004449.1-201ENST00000564240 433 ntBASIC11.76□□□□□ -0.53
FAM78BQ5VT40 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 AC023511.2-201ENST00000618803 211 ntBASIC11.76□□□□□ -0.53
FAM78BQ5VT40 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 AL033527.5-202ENST00000641632 1098 ntBASIC11.76□□□□□ -0.53
FAM78BQ5VT40 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 CETN4P-206ENST00000642099 2168 ntBASIC11.76□□□□□ -0.53
FAM78BQ5VT40 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.76□□□□□ -0.53
FAM78BQ5VT40 AC015818.8-201ENST00000587907 1519 ntBASIC11.76□□□□□ -0.53
FAM78BQ5VT40 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 KRT8P24-201ENST00000560290 1559 ntBASIC11.75□□□□□ -0.53
FAM78BQ5VT40 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.75□□□□□ -0.53
FAM78BQ5VT40 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 AC090505.1-201ENST00000430515 1834 ntBASIC11.75□□□□□ -0.53
FAM78BQ5VT40 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 AC109322.1-201ENST00000524499 1264 ntBASIC11.75□□□□□ -0.53
FAM78BQ5VT40 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 AC025678.2-201ENST00000562061 970 ntBASIC11.75□□□□□ -0.53
FAM78BQ5VT40 LINC01115-203ENST00000606068 577 ntBASIC11.75□□□□□ -0.53
FAM78BQ5VT40 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.75□□□□□ -0.53
FAM78BQ5VT40 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms