Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 AC127383.1-201ENST00000444697 1800 ntBASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 RN7SKP230-201ENST00000365642 335 ntBASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 RPL5P21-201ENST00000404620 815 ntBASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 PHBP15-201ENST00000574228 665 ntBASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CTC1Q2NKJ3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 AL157414.3-201ENST00000624276 1954 ntBASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 NDUFS6P1-201ENST00000485187 316 ntBASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 AL161773.1-201ENST00000624845 863 ntBASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 PAX6-247ENST00000638965 979 ntTSL 5 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 AC140479.7-201ENST00000636301 2332 ntBASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTC1Q2NKJ3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTC1Q2NKJ3 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms