Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.35□□□□□ -0.43
LMO1P25800 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
LMO1P25800 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LMO1P25800 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LMO1P25800 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.35□□□□□ -0.43
LMO1P25800 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LMO1P25800 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.34□□□□□ -0.43
LMO1P25800 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO1P25800 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.34□□□□□ -0.43
LMO1P25800 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
LMO1P25800 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.34□□□□□ -0.43
LMO1P25800 TCAM1P-207ENST00000485295 1537 ntBASIC12.34□□□□□ -0.43
LMO1P25800 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.34□□□□□ -0.43
LMO1P25800 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LMO1P25800 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 ARSEP1-201ENST00000420443 635 ntBASIC12.34□□□□□ -0.43
LMO1P25800 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 AC007551.1-201ENST00000457394 519 ntBASIC12.34□□□□□ -0.43
LMO1P25800 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
LMO1P25800 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
LMO1P25800 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
LMO1P25800 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO1P25800 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.34□□□□□ -0.43
LMO1P25800 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
LMO1P25800 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO1P25800 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 AC016397.2-201ENST00000624848 1985 ntBASIC12.34□□□□□ -0.43
LMO1P25800 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO1P25800 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LMO1P25800 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LMO1P25800 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO1P25800 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO1P25800 AL161772.1-201ENST00000610494 4412 ntBASIC12.34□□□□□ -0.43
LMO1P25800 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
LMO1P25800 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.33□□□□□ -0.43
LMO1P25800 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
LMO1P25800 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.33□□□□□ -0.43
LMO1P25800 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
LMO1P25800 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.33□□□□□ -0.44
LMO1P25800 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.33□□□□□ -0.44
LMO1P25800 Z82170.1-201ENST00000625081 3192 ntBASIC12.33□□□□□ -0.44
LMO1P25800 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
LMO1P25800 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO1P25800 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LMO1P25800 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO1P25800 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LMO1P25800 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO1P25800 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
LMO1P25800 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
LMO1P25800 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms