Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TPM2P07951 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 AC018442.1-201ENST00000421439 2061 ntBASIC16.82■□□□□ 0.28
TPM2P07951 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 AC125807.1-201ENST00000483097 614 ntBASIC16.82■□□□□ 0.28
TPM2P07951 AC004066.1-201ENST00000502488 802 ntBASIC16.82■□□□□ 0.28
TPM2P07951 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.82■□□□□ 0.28
TPM2P07951 AC069120.2-201ENST00000524091 540 ntBASIC16.82■□□□□ 0.28
TPM2P07951 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.82■□□□□ 0.28
TPM2P07951 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.82■□□□□ 0.28
TPM2P07951 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.82■□□□□ 0.28
TPM2P07951 AC010336.2-201ENST00000564226 506 ntBASIC16.82■□□□□ 0.28
TPM2P07951 SAMD11P1-201ENST00000571429 661 ntBASIC16.82■□□□□ 0.28
TPM2P07951 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM2P07951 AL138828.2-201ENST00000615812 383 ntBASIC16.82■□□□□ 0.28
TPM2P07951 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.82■□□□□ 0.28
TPM2P07951 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM2P07951 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TPM2P07951 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM2P07951 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TPM2P07951 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM2P07951 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TPM2P07951 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM2P07951 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TPM2P07951 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TPM2P07951 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 AC004899.2-201ENST00000622993 3860 ntBASIC16.81■□□□□ 0.28
TPM2P07951 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TPM2P07951 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TPM2P07951 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC16.81■□□□□ 0.28
TPM2P07951 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TPM2P07951 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 TUBB3P1-201ENST00000405796 1332 ntBASIC16.81■□□□□ 0.28
TPM2P07951 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TPM2P07951 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TPM2P07951 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.81■□□□□ 0.28
TPM2P07951 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TPM2P07951 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.81■□□□□ 0.28
TPM2P07951 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TPM2P07951 AC004461.2-201ENST00000629517 803 ntBASIC16.81■□□□□ 0.28
TPM2P07951 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM2P07951 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 AL022323.5-201ENST00000624101 2059 ntBASIC16.81■□□□□ 0.28
TPM2P07951 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TPM2P07951 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM2P07951 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM2P07951 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM2P07951 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM2P07951 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM2P07951 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM2P07951 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM2P07951 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms