Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.28■□□□□ 0.04
IFNB1P01574 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 CICP16-201ENST00000502609 2813 ntBASIC15.28■□□□□ 0.04
IFNB1P01574 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
IFNB1P01574 MIR770-201ENST00000390219 98 ntBASIC15.28■□□□□ 0.04
IFNB1P01574 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
IFNB1P01574 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.28■□□□□ 0.04
IFNB1P01574 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.28■□□□□ 0.04
IFNB1P01574 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.28■□□□□ 0.04
IFNB1P01574 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.28■□□□□ 0.04
IFNB1P01574 AC008494.3-201ENST00000606615 944 ntBASIC15.28■□□□□ 0.04
IFNB1P01574 INE2-201ENST00000630399 1874 ntBASIC15.28■□□□□ 0.04
IFNB1P01574 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
IFNB1P01574 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.28■□□□□ 0.04
IFNB1P01574 AL359881.3-201ENST00000602640 1721 ntBASIC15.28■□□□□ 0.04
IFNB1P01574 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.28■□□□□ 0.04
IFNB1P01574 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.28■□□□□ 0.04
IFNB1P01574 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNB1P01574 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.28■□□□□ 0.04
IFNB1P01574 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
IFNB1P01574 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
IFNB1P01574 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
IFNB1P01574 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
IFNB1P01574 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
IFNB1P01574 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
IFNB1P01574 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
IFNB1P01574 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.27■□□□□ 0.04
IFNB1P01574 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
IFNB1P01574 MEX3B-202ENST00000558133 4333 ntBASIC15.27■□□□□ 0.04
IFNB1P01574 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 ACKR1-201ENST00000368121 1240 ntBASIC15.27■□□□□ 0.04
IFNB1P01574 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.27■□□□□ 0.04
IFNB1P01574 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
IFNB1P01574 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFNB1P01574 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.27■□□□□ 0.04
IFNB1P01574 AL162726.2-201ENST00000438986 1017 ntBASIC15.27■□□□□ 0.04
IFNB1P01574 CTBP2P3-201ENST00000585629 1255 ntBASIC15.27■□□□□ 0.04
IFNB1P01574 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.27■□□□□ 0.04
IFNB1P01574 AJ011932.1-201ENST00000621707 465 ntBASIC15.27■□□□□ 0.04
IFNB1P01574 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFNB1P01574 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
IFNB1P01574 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
IFNB1P01574 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
IFNB1P01574 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
IFNB1P01574 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.27■□□□□ 0.03
IFNB1P01574 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
IFNB1P01574 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.27■□□□□ 0.03
IFNB1P01574 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFNB1P01574 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
IFNB1P01574 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFNB1P01574 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
IFNB1P01574 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.26■□□□□ 0.03
IFNB1P01574 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.26■□□□□ 0.03
IFNB1P01574 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.26■□□□□ 0.03
IFNB1P01574 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
IFNB1P01574 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.26■□□□□ 0.03
IFNB1P01574 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
IFNB1P01574 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.26■□□□□ 0.03
IFNB1P01574 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNB1P01574 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.26■□□□□ 0.03
IFNB1P01574 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.26■□□□□ 0.03
IFNB1P01574 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.26■□□□□ 0.03
IFNB1P01574 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.26■□□□□ 0.03
IFNB1P01574 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms